Phylogenetic Analysis for 2019-NCoV

Data source:

Sampele_NameQuery_ID[1]Completeness
BetaCoV/Wuhan/IPBCAMS-WH-01/2019GWHABKF00000000Complete
BetaCoV/Wuhan/IPBCAMS-WH-02/2019GWHABKG00000000Complete
BetaCoV/Wuhan/IPBCAMS-WH-03/2019GWHABKH00000000Complete
BetaCoV/Wuhan/IPBCAMS-WH-04/2019GWHABKI00000000Complete
BetaCoV/Wuhan/IPBCAMS-WH-05/2020GWHABKJ00000000Complete
WIV02GWHABKK00000000Complete
WIV04GWHABKL00000000Complete
WIV05GWHABKM00000000Complete
WIV06GWHABKN00000000Complete
WIV07GWHABKO00000000Complete
TG13GWHABKP00000000Complete
Wuhan-Hu-1MN908947Complete
2019-nCoV_HKU-SZ-002a_2020MN938384Complete
2019-nCoV_HKU-SZ-005b_2020MN975262Complete
2019-nCoV/USA-WA1/2020MN985325Complete
2019-nCoV WHU01MN988668Complete
2019-nCoV WHU02MN988669Complete
2019-nCoV/USA-IL1/2020MN988713Complete
2019-nCoV/USA-CA1/2020MN994467Complete
2019-nCoV/USA-CA2/2020MN994468Complete
2019-nCoV/USA-AZ1/2020MN997409Complete
BetaCoV/Australia/VIC01/2020MT007544Complete
BetaCoV/Wuhan/WH-01/2019NMDC60013002-01Complete
BetaCoV/Wuhan/WH-03/2019NMDC60013002-03Complete
BetaCoV/Wuhan/WH-04/2019NMDC60013002-04Complete
BetaCoV/Wuhan/WH19002/2019NMDC60013002-05Complete
BetaCoV/Wuhan/WH19008/2019 NMDC60013002-06Complete
BetaCoV/Wuhan/YS8011/2020NMDC60013002-07Complete
BetaCoV/Wuhan/WH19001/2019NMDC60013002-08Complete
BetaCoV/Wuhan/WH19004/2020NMDC60013002-09Complete
BetaCoV/Wuhan/WH19005/2019NMDC60013002-10Complete
2019-nCoV_HKU-SZ-001_2020MN938385Partial/gene level
2019-nCoV_HKU-SZ-004_2020MN938386Partial/gene level
2019-nCoV_HKU-SZ-001_2020MN938387Partial/gene level
2019-nCoV_HKU-SZ-002b_2020MN938388Partial/gene level
2019-nCoV_HKU-SZ-004_2020MN938389Partial/gene level
2019-nCoV_HKU-SZ-005_2020MN938390Partial/gene level
SI200040-SPMN970003Partial/gene level
SI200121-SPMN970004Partial/gene level
2019-nCoV_HKU-SZ-007a_2020MN975263Partial/gene level
2019-nCoV_HKU-SZ-007b_2020MN975264Partial/gene level
2019-nCoV_HKU-SZ-007c_2020MN975265Partial/gene level
2019-nCoV_HKU-SZ-007a_2020MN975266Partial/gene level
2019-nCoV_HKU-SZ-007b_2020MN975267Partial/gene level
2019-nCoV_HKU-SZ-007c_2020MN975268Partial/gene level
2019 nCoV/Italy-INMI1MT008022Partial/gene level
2019 nCoV/Italy-INMI2MT008023Partial/gene level
BetaCoV/Wuhan/WH-02/2019NMDC60013002-02Partial/scaffold level
  • [1]: With download link, click for downlaod fasta file.
  • [2]: GISAID data is not public available.

Last modified on 2023-11-01